Can a person have chlamydia in their throat? The answer is yes! Although it more commonly affects certain body parts, it can also affect one’s throat. While sore throats are the most prevalent symptom of oral or pharyngeal chlamydia (chlamydia in the throat), many patients do not have any throat symptoms. Chlamydia in the throat can also be mistaken for other conditions, including allergies, strep throat, the flu, colds, or acid reflux. #chlamydia #stdawareness #stdtesting #gonorrhea Did you know you could also get gonorrhea(the clap) in the throat/mouth?